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Archaic ancestry inference in imputed ancient human genomes
Capodiferro M, Planche L, Breslin E, Ongaro L, Ávila-Arcos M, Jay F, Cassidy L, Huerta-Sanchez E.
bioRxiv · doi:10.1101/2025.07.23.664192
A high coverage Mesolithic aurochs genome and effective leveraging of ancient cattle genomes using whole genome imputation
Erven JA, Scheu A, Verdugo MP, Cassidy L, Chen N, Gehlen B, Street M, Madsen O, Mullin VE.
bioRxiv · doi:10.1101/2024.01.23.576850
A High-Coverage Mesolithic Aurochs Genome and Effective Leveraging of Ancient Cattle Genomes Using Whole Genome Imputation
Erven JAM, Scheu A, Verdugo MP, Cassidy L, Chen N, Gehlen B, Street M, Madsen O, Mullin VE.
Molecular biology and evolution · doi:10.1093/molbev/msae076 · PMC11090068
Inferring Population Histories for Ancient Genomes Using Genome-Wide Genealogies
Speidel L, Cassidy L, Davies RW, Hellenthal G, Skoglund P, Myers SR.
Molecular biology and evolution · doi:10.1093/molbev/msab174 · PMC8383901
Inferring population histories for ancient genomes using genome-wide genealogies
Speidel L, Cassidy L, Davies RW, Hellenthal G, Skoglund P, Myers SR.
Preprint (PPR284295) · doi:10.1101/2021.02.17.431573