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Topics in this archive
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Ancient DNA and Genomics·2025
Read Length Dominates Phylogenetic Placement Accuracy of Ancient DNA Reads
Bettisworth B, Psonis N, Poulakakis N, Pavlidis P, Stamatakis A.
Molecular biology and evolution · doi:10.1093/molbev/msaf006 · PMC11839404
Neanderthal and Denisovan·2023
Balancing selection on genomic deletion polymorphisms in humans
Aqil A, Speidel L, Pavlidis P, Gokcumen O.
eLife · doi:10.7554/elife.79111 · PMC9943071
Neanderthal and Denisovan·2017
VCFtoTree: a user-friendly tool to construct locus-specific alignments and phylogenies from thousands of anthropologically relevant genome sequences
Xu D, Jaber Y, Pavlidis P, Gokcumen O.
BMC bioinformatics · doi:10.1186/s12859-017-1844-0 · PMC5615795