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Genetic transitions in the Neolithic and Bronze Age at Mas d'en Boixos (Catalonia, Spain)
Roca-Rada X, Cuesta-Aguirre DR, Vinueza-Espinosa DC, Davidson R, Ravishankar S, Taufik L, Armentano N, Esteve X, Souilmi Y, Teixeira JC, Malgosa A, Llamas B,…
iScience · doi:10.1016/j.isci.2025.112871 · PMC12273517
The genetic history of Portugal over the past 5,000 years
Roca-Rada X, Davidson R, Williams MP, Villalba-Mouco V, Carvalho AF, Ravishankar S, Collen E, Haarkötter C, Taufik L, Cuesta-Aguirre DR, Tente C, Calleja ÁMM…
Genome biology · doi:10.1186/s13059-025-03707-2 · PMC12360031
Filtering out the noise: metagenomic classifiers optimize ancient DNA mapping
Ravishankar S, Perez V, Davidson R, Roca-Rada X, Lan D, Souilmi Y, Llamas B.
Briefings in bioinformatics · doi:10.1093/bib/bbae646 · PMC11646131
Ancient genomes reveal over two thousand years of dingo population structure
Souilmi Y, Wasef S, Williams MP, Conroy G, Bar I, Bover P, Dann J, Heiniger H, Llamas B, Ogbourne S, Archer M, Ballard JWO, Reed E, Tobler R, Koungoulos L, W…
Proceedings of the National Academy of Sciences of the United States of America · doi:10.1073/pnas.2407584121 · PMC11287250
The role of genetic selection and climatic factors in the dispersal of anatomically modern humans out of Africa
Tobler R, Souilmi Y, Huber CD, Bean N, Turney CSM, Grey ST, Cooper A.
Proceedings of the National Academy of Sciences of the United States of America · doi:10.1073/pnas.2213061120 · PMC10235988
Admixture has obscured signals of historical hard sweeps in humans
Souilmi Y, Tobler R, Johar A, Williams M, Grey ST, Schmidt J, Teixeira JC, Rohrlach A, Tuke J, Johnson O, Gower G, Turney C, Cox M, Cooper A, Huber CD.
Nature ecology & evolution · doi:10.1038/s41559-022-01914-9 · PMC9715430
Ancient mitochondrial genomes from the Argentinian Pampas inform the early peopling of the Southern Cone of South America
Roca-Rada X, Politis G, Messineo PG, Scheifler N, Scabuzzo C, González M, Harkins KM, Reich D, Souilmi Y, Teixeira JC, Llamas B, Fehren-Schmitz L.
iScience · doi:10.1016/j.isci.2021.102553 · PMC8188552
Genetic and climatic factors in the dispersal of Anatomically Modern Humans Out of Africa
Tobler R, Souilmi Y, Huber C, Bean N, Turney C, Cooper A, Grey S.
Preprint (PPR386233) · doi:10.21203/rs.3.rs-800178/v1
Ancient DNA Studies in Pre-Columbian Mesoamerica
Roca-Rada X, Souilmi Y, Teixeira JC, Llamas B.
Genes · doi:10.3390/genes11111346 · PMC7696771
An ancient viral epidemic involving host coronavirus interacting genes more than 20,000 years ago in East Asia
Souilmi Y, Lauterbur ME, Tobler R, Huber CD, Johar AS, Enard D.
Preprint (PPR238799) · doi:10.1101/2020.11.16.385401