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Showing 11–20 of 32
Using Y-chromosome capture enrichment to resolve haplogroup H2 shows new evidence for a two-path Neolithic expansion to Western Europe
Rohrlach AB, Papac L, Childebayeva A, Rivollat M, Villalba-Mouco V, Neumann GU, Penske S, Skourtanioti E, van de Loosdrecht M, Akar M, Boyadzhiev K, Boyadzhi…
Scientific reports · doi:10.1038/s41598-021-94491-z · PMC8298398
A 3,000-year-old, basal S. enterica lineage from Bronze Age Xinjiang suggests spread along the Proto-Silk Road
Wu X, Ning C, Key FM, Andrades Valtueña A, Lankapalli AK, Gao S, Yang X, Zhang F, Liu L, Nie Z, Ma J, Krause J, Herbig A, Cui Y.
PLoS pathogens · doi:10.1371/journal.ppat.1009886 · PMC8486138
CoproID predicts the source of coprolites and paleofeces using microbiome composition and host DNA content
Borry M, Cordova B, Perri A, Wibowo M, Prasad Honap T, Ko J, Yu J, Britton K, Girdland-Flink L, Power RC, Stuijts I, Salazar-García DC, Hofman C, Hagan R, Sa…
PeerJ · doi:10.7717/peerj.9001 · PMC7169968
Comparison of target enrichment strategies for ancient pathogen DNA
Furtwängler A, Neukamm J, Böhme L, Reiter E, Vollstedt M, Arora N, Singh P, Cole ST, Knauf S, Calvignac-Spencer S, Krause-Kyora B, Krause J, Schuenemann VJ,…
Preprint (PPR185942) · doi:10.1101/2020.07.09.195065
A treponemal genome from an historic plague victim supports a recent emergence of yaws and its presence in 15<sup>th</sup> century Europe
Giffin K, Lankapalli AK, Sabin S, Spyrou MA, Posth C, Kozakaitė J, Friedrich R, Miliauskienė Ž, Jankauskas R, Herbig A, Bos KI.
Scientific reports · doi:10.1038/s41598-020-66012-x · PMC7290034
2000-year-old pathogen genomes reconstructed from metagenomic analysis of Egyptian mummified individuals
Neukamm J, Pfrengle S, Molak M, Seitz A, Francken M, Eppenberger P, Avanzi C, Reiter E, Urban C, Welte B, Stockhammer PW, Teßmann B, Herbig A, Harvati K, Nie…
BMC biology · doi:10.1186/s12915-020-00839-8 · PMC7456089
A seventeenth-century Mycobacterium tuberculosis genome supports a Neolithic emergence of the Mycobacterium tuberculosis complex
Sabin S, Herbig A, Vågene ÅJ, Ahlström T, Bozovic G, Arcini C, Kühnert D, Bos KI.
Genome biology · doi:10.1186/s13059-020-02112-1 · PMC7418204
HOPS: automated detection and authentication of pathogen DNA in archaeological remains
Hübler R, Key FM, Warinner C, Bos KI, Krause J, Herbig A.
Genome biology · doi:10.1186/s13059-019-1903-0 · PMC6913047
Ancient <i>Yersinia pestis</i> genomes from across Western Europe reveal early diversification during the First Pandemic (541-750)
Keller M, Spyrou MA, Scheib CL, Neumann GU, Kröpelin A, Haas-Gebhard B, Päffgen B, Haberstroh J, Ribera I Lacomba A, Raynaud C, Cessford C, Durand R, Stadler…
Proceedings of the National Academy of Sciences of the United States of America · doi:10.1073/pnas.1820447116 · PMC6589673
A seventeenth-century Mycobacterium tuberculosis genome supports a Neolithic emergence of the Mycobacterium tuberculosis complex
Sabin S, Herbig A, Vågene ÅJ, Ahlström T, Bozovic G, Arcini C, Kühnert D, Bos KI.
Preprint (PPR74097) · doi:10.1101/588277