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Topics in this archive
Showing 1–10 of 30
Robust and accurate Bayesian inference of genome-wide genealogies for hundreds of genomes
Deng Y, Nielsen R, Song YS.
Nature genetics · doi:10.1038/s41588-025-02317-9 · PMC12425808
A general framework for branch length estimation in Ancestral Recombination Graphs
Deng Y, DeWitt WS, Song YS, Nielsen R.
Proceedings of the National Academy of Sciences of the United States of America · doi:10.1073/pnas.2504461122 · PMC12684933
Genetic architecture in Greenland is shaped by demography, structure and selection
Stæger FF, Andersen MK, Li Z, Hjerresen JP, He S, Santander CG, Jensen RT, Rex KF, Thuesen ACB, Hanghøj K, Seiding IH, Jørsboe E, Stinson SE, Rasmussen MS, B…
Nature · doi:10.1038/s41586-024-08516-4 · PMC11903302
Revisiting the Briggs Ancient DNA Damage Model: A Fast Maximum Likelihood Method to Estimate Post-Mortem Damage
Zhao L, Henriksen RA, Ramsøe A, Nielsen R, Korneliussen TS.
Molecular ecology resources · doi:10.1111/1755-0998.14029 · PMC11646307
100 ancient genomes show repeated population turnovers in Neolithic Denmark
Allentoft ME, Sikora M, Fischer A, Sjögren KG, Ingason A, Macleod R, Rosengren A, Schulz Paulsson B, Jørkov MLS, Novosolov M, Stenderup J, Price TD, Fischer…
Nature · doi:10.1038/s41586-023-06862-3 · PMC10781617
Fast and Accurate Estimation of Selection Coefficients and Allele Histories from Ancient and Modern DNA
Vaughn AH, Nielsen R.
Molecular biology and evolution · doi:10.1093/molbev/msae156 · PMC11321360
Bayesian inference of admixture graphs on Native American and Arctic populations
Nielsen SV, Vaughn AH, Leppälä K, Landis MJ, Mailund T, Nielsen R.
PLoS genetics · doi:10.1371/journal.pgen.1010410 · PMC9956672
Population genomics of postglacial western eurasia
Allentoft ME, Sikora M, Refoyo-Martínez A, Irving-Pease EK, Fischer A, Barrie W, Ingason A, Stenderup J, Sjögren K, Pearson A, Sousa da Mota B, Paulsson BS,…
bioRxiv · doi:10.1101/2022.05.04.490594
Elevated genetic risk for multiple sclerosis originated in Steppe Pastoralist populations
Barrie W, Yang Y, Irving-Pease EK, Attfield KE, Scorrano G, Jensen LT, Armen AP, Dimopoulos EA, Stern A, Refoyo-Martinez A, Ramsøe A, Gaunitz C, Demeter F, J…
bioRxiv · doi:10.1101/2022.09.23.509097
The Selection Landscape and Genetic Legacy of Ancient Eurasians
Irving-Pease EK, Refoyo-Martínez A, Ingason A, Pearson A, Fischer A, Barrie W, Sjögren K, Halgren AS, Macleod R, Demeter F, Henriksen RA, Vimala T, McColl H,…
bioRxiv · doi:10.1101/2022.09.22.509027