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Topics in this archive
Showing 1–10 of 10
Genomic reconstruction of upland cotton domestication uncovers staged selection, gene flow, and flowering-time adaptation
Xu Y, Cai X, Zhou Z, Lopez-Arredondo D, Hou Y, Zheng J, Li H, Sun G, Jin D, Dai P, Wei Y, Liu Y, Li P, Liu Q, Wang H, Sun R, Li L, Pan X, Wang K, Du X, Song…
Proceedings of the National Academy of Sciences of the United States of America · doi:10.1073/pnas.2601246123 · PMC13320693
Cross-continental transmission and host adaptation of Mycobacterium tuberculosis in China unveiled by population history reconstruction and adaptive evolution signal detection
Wu W, Liu Z, Chen H, Tang Y, Jiang Z, Zhang Y, Zhang A, Zhou Z, Marks RS, Zhang F, Yuan H, Yu Y, Mao K, Dinnyés A, Rastogi N, Xie J, Sun Q.
iMetaOmics · doi:10.1002/imo2.70052 · PMC12806118
An ancient ecospecies of Helicobacter pylori
Tourrette E, Torres RC, Svensson SL, Matsumoto T, Miftahussurur M, Fauzia KA, Alfaray RI, Vilaichone RK, Tuan VP, Helicobacter Genomics Consortium, Wang D, Y…
Nature · doi:10.1038/s41586-024-07991-z · PMC11541087
Molecular and Serological Surveillance for Mycobacterium leprae and Mycobacterium lepromatosis in Wild Red Squirrels (Sciurus vulgaris) from Scotland and Northern England
Zhou Z, van Hooij A, Wassenaar GN, Seed E, Verhard-Seymonsbergen EM, Corstjens PLAM, Meredith AL, Wilson LA, Milne EM, Beckmann KM, Geluk A.
Animals : an open access journal from MDPI · doi:10.3390/ani14132005 · PMC11240566
Helicobacter pylori's historical journey through Siberia and the Americas
Moodley Y, Brunelli A, Ghirotto S, Klyubin A, Maady AS, Tyne W, Muñoz-Ramirez ZY, Zhou Z, Manica A, Linz B, Achtman M.
Proceedings of the National Academy of Sciences of the United States of America · doi:10.1073/pnas.2015523118 · PMC8237685
Metagenomics of the modern and historical human oral microbiome with phylogenetic studies on Streptococcus mutans and Streptococcus sobrinus
Achtman M, Zhou Z.
Philosophical transactions of the Royal Society of London. Series B, Biological sciences · doi:10.1098/rstb.2019.0573 · PMC7702799
The EnteroBase user's guide, with case studies on <i>Salmonella</i> transmissions, <i>Yersinia pestis</i> phylogeny, and <i>Escherichia</i> core genomic diversity
Zhou Z, Alikhan NF, Mohamed K, Fan Y, Agama Study Group, Achtman M.
Genome research · doi:10.1101/gr.251678.119 · PMC6961584
GrapeTree: visualization of core genomic relationships among 100,000 bacterial pathogens
Zhou Z, Alikhan NF, Sergeant MJ, Luhmann N, Vaz C, Francisco AP, Carriço JA, Achtman M.
Genome research · doi:10.1101/gr.232397.117 · PMC6120633
Eighteenth-century genomes show that mixed infections were common at time of peak tuberculosis in Europe
Kay GL, Sergeant MJ, Zhou Z, Chan JZ, Millard A, Quick J, Szikossy I, Pap I, Spigelman M, Loman NJ, Achtman M, Donoghue HD, Pallen MJ.
Nature communications · doi:10.1038/ncomms7717 · PMC4396363
Paternal genetic structure of Hainan aborigines isolated at the entrance to East Asia
Li D, Li H, Ou C, Lu Y, Sun Y, Yang B, Qin Z, Zhou Z, Li S, Jin L.
PloS one · doi:10.1371/journal.pone.0002168 · PMC2374892