Showing 61–70 of 320
Wet Lab Protocols Matter: Choice of DNA Extraction and Library Preparation Protocols Bias Ancient Oral Microbiome Recovery
Wright SL, Abdul-Aziz M, Blaha GN, Ta CK, Gancz A, Ademola-Popoola IJ, Szécsényi-Nagy A, Sereno PC, Weyrich LS.
Molecular ecology resources · doi:10.1111/1755-0998.70054 · PMC12550470
LYCEUM: learning to call copy number variants on low-coverage ancient genomes
Yılmaz MA, Ceylan AA, Kaynar G, Çiçek AE.
Bioinformatics (Oxford, England) · doi:10.1093/bioinformatics/btaf244 · PMC12261418
Revisiting the Briggs Ancient DNA Damage Model: A Fast Maximum Likelihood Method to Estimate Post-Mortem Damage
Zhao L, Henriksen RA, Ramsøe A, Nielsen R, Korneliussen TS.
Molecular ecology resources · doi:10.1111/1755-0998.14029 · PMC11646307
READv2: Advanced and user-friendly detection of biological relatedness in archaeogenomics
Alaçamlı E, Naidoo T, Aktürk Ş, Güler MN, Mapelli I, Vural KB, Somel M, Malmström H, Günther T.
bioRxiv · doi:10.1101/2024.01.23.576660
Detection of chromosomal aneuploidy in ancient genomes
Anastasiadou K, Silva M, Booth T, Speidel L, Audsley T, Barrington C, Buckberry J, Fernandes D, Ford B, Gibson M, Gilardet A, Glocke I, Keefe K, Kelly M, Mas…
Communications biology · doi:10.1038/s42003-023-05642-z · PMC10784527
Ancient DNA sheds light on the funerary practices of late Neolithic collective burial in southern France
Arzelier A, De Belvalet H, Pemonge MH, Garberi P, Binder D, Duday H, Deguilloux MF, Pruvost M.
Proceedings. Biological sciences · doi:10.1098/rspb.2024.1215 · PMC11349438
Towards predicting the geographical origin of ancient samples with metagenomic data
Bozzi D, Neuenschwander S, Cruz Dávalos DI, Sousa da Mota B, Schroeder H, Moreno-Mayar JV, Allentoft ME, Malaspinas AS.
Scientific reports · doi:10.1038/s41598-023-40246-x · PMC11411106
Unravelling reference bias in ancient DNA datasets
Dolenz S, van der Valk T, Jin C, Oppenheimer J, Sharif MB, Orlando L, Shapiro B, Dalén L, Heintzman PD.
Bioinformatics (Oxford, England) · doi:10.1093/bioinformatics/btae436 · PMC11254355
Corroborating written history with ancient DNA: The case of the Well-man described in an Old Norse <i>saga</i>
Ellegaard MR, Ebenesersdóttir SS, Moore KHS, Petersén A, Vågene ÅJ, Bieker VC, Denham SD, Cavalleri GL, Gilbert E, Werge T, Hansen TF, Kockum I, Alfredsson L…
iScience · doi:10.1016/j.isci.2024.111076 · PMC11607536
A high coverage Mesolithic aurochs genome and effective leveraging of ancient cattle genomes using whole genome imputation
Erven JA, Scheu A, Verdugo MP, Cassidy L, Chen N, Gehlen B, Street M, Madsen O, Mullin VE.
bioRxiv · doi:10.1101/2024.01.23.576850
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